Spatial Omics Publications

Publications in Spatial Omics

Explore the most influential research papers and scholarly works that have shaped Spatial Omics. Use the concept filter below to focus on a specific sub-area of research.

Spatial Omics

1.5K

Publications

195.5K

Citations

Showing yearly statistics from 2000-2026.

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	Year	Citations
Integrating single-cell transcriptomic data across different conditions, technologies, and species Andrew Butler, Paul Hoffman, Peter Smibert, Nature Biotechnology EngineeringGeneticsMultiomicsSingle-cell Transcriptomic DataTranscriptomics Technology	2018	14.1K
Fast, sensitive and accurate integration of single-cell data with Harmony Ilya Korsunsky, Nghia Millard, Jean Fan, Nature Methods BioinformaticsEngineeringData ScienceSingle Cell SequencingMedicine	2019	9.5K
Spatial reconstruction of single-cell gene expression data Rahul Satija, Jeffrey A. Farrell, David Gennert, Nature Biotechnology Functional GenomicsEngineeringSingle Cell SequencingMedicineSpatial Omics	2015	7.3K
Broad patterns of gene expression revealed by clustering analysis of tumor and normal colon tissues probed by oligonucleotide arrays Uri Alon, Naama Barkai, Daniel A. Notterman, Proceedings of the National Academy of Sciences Two-way Clustering MethodEngineeringPathologyTranscriptomics TechnologyGene Recognition	1999	4.2K
Analysis of the Human Tissue-specific Expression by Genome-wide Integration of Transcriptomics and Antibody-based Proteomics Linn Fagerberg, Björn M. Hallström, Per Oksvold, Molecular & Cellular Proteomics EngineeringImmunologyPathologyTranscriptomics TechnologyGenome-wide Integration	2013	3.7K
Normalization for cDNA microarray data: a robust composite method addressing single and multiple slide systematic variation Nucleic Acids Research Microarray Sample PoolEngineeringTranscriptomics TechnologyGenomicsSpatial Omics	2002	3.5K
Positional information and the spatial pattern of cellular differentiation Lewis Wolpert Journal of Theoretical Biology Pattern FormationDevelopmental BiologyCell DivisionMedicineMorphogenesis	1969	3.1K
Slide-seq: A scalable technology for measuring genome-wide expression at high spatial resolution Samuel G. Rodriques, Robert R. Stickels, Aleksandrina Goeva, Science Traumatic Brain InjuryEngineeringGeneticsTranscriptomics TechnologyGenomics	2019	2.4K
The Human Cell Atlas eLife BioinformaticsHuman BodyHuman CellFunctional GenomicsHuman Cell Types	2017	2.2K
Efficient proximity labeling in living cells and organisms with TurboID Tess C. Branon, Justin A. Bosch, Ariana D. Sanchez, Nature Biotechnology Pattern FormationEngineeringCell DivisionMedicineComputational Biology	2018	2.1K
Adult mouse cortical cell taxonomy revealed by single cell transcriptomics Bosiljka Tasic, Vilas Menon, Thuc Nghi Nguyen, Nature Neuroscience Molecular NeuroscienceDevelopmental BiologyFunctional GenomicsSingle Cell TranscriptomicsMedicine	2016	1.9K
Recovering Gene Interactions from Single-Cell Data Using Data Diffusion David van Dijk, Roshan Sharma, Juozas Nainys, Cell BioinformaticsFunctional GenomicsEngineeringSingle Cell SequencingGene Interactions	2018	1.8K

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